Tools
Tools
Analysis is crucial to efficiently using data. In this section we present novel software tools for analysing diverse types of biological data with a focus on plant-related questions.
- IPK Galaxy Blast Suite
https://galaxy-web.ipk-gatersleben.de/
- Kmasker Plants
https://kmasker.ipk-gatersleben.de/
Beier S, Ulpinnis C, Schwalbe M, Münch T, Hoffie R, Koeppel I, Hertig C, Budhagatapalli N, Hiekel S, Pathi K M, Hensel G, Grosse M, Chamas S, Gerasimova S, Kumlehn J, Scholz U, Schmutzer T (2020) Kmasker plants – a tool for assessing complex sequence space in plant species. Plant J. 102, 631-642.
https://dx.doi.org/10.1111/tpj.14645
- MISA Web
https://webblast.ipk-gatersleben.de/misa/
Beier S, Thiel T, Münch T, Scholz U, Mascher M (2017) MISA-web: a web server for microsatellite prediction. Bioinformatics, 33, 2583–2585. (https://dx.doi.org/10.1093/bioinformatics/btx198)